====== Publications Scientifiques ====== ===== 2020 ===== * **Barnes Loic, Allouche Abdul-Rahman, Chambert Stéphane, Schindler Baptiste, Compagnon Isabelle **, Ion spectroscopy of heterogeneous mixtures: IRMPD and DFT analysis of anomers and conformers of monosaccharides, **//International Journal of Mass Spectrometry//**, 2020 * **R. Schira, F. Rabilloud **, Oxidation-Induced Surface Plasmon Band Fragmentation in Silver Clusters, **//J. Phys. Chem.//** C 124, 968-975 (2020) ===== 2019 ===== * **Marius Socol, Renjie Wang, Daniel Jost, Pascal Carrivain, Cédric Vaillant, Eric Le Cam, Vincent Dahirel, Christophe Normand, Kerstin Bystricky, Jean-Marc Victor, Olivier Gadal, Aurélien Bancaud **, Rouse model with transient intramolecular contacts on a timescale of seconds recapitulates folding and fluctuation of yeast chromosomes, **//Nucleic Acids Research//**,Volume 47, Issue 12, 09 July 2019, Pages 6195–6207, https://doi.org/10.1093/nar/gkz374 * **Sheikha Lardhi, Antton Curutchet, Luigi Cavallo, Moussab Harb, Tangui Le Bahers. ** Ab initio assessment of Bi 1−x RE x CuOS (RE = La, Gd, Y, Lu) solid solutions as a semiconductor for photochemical water splitting. **//Physical Chemistry Chemical Physics, Royal Society of Chemistry//**, 2017, 19 (19), pp.12321 - 12330. ⟨10.1039/c7cp01684k⟩. ⟨hal-01889554⟩ * **O. Liot, D. Martin-Calle, A. Gay, J. Salort, F. Chillà and M. Bourgoin **, Pair dispersion in inhomogeneous turbulent thermal convection **//Phys. Rev. Fluids//**, 4, 094603 (2019) http://dx.doi.org/10.1103/PhysRevFluids.4.094603 * **Chaabene Marwa, and Gassoumi Bouzid, Mignon Pierre, Chaâbane Rafik Ben and Allouche Abdul-Rahman**, New zinc phthalocyanine derivatives for nitrogen dioxide sensors: A theoretical optoelectronic investigation, **//Journal of Molecular Graphics and Modelling//**, 2019 * **Hervé Marius, Brédy Richard, Karras Gabriel, Concina Bruno, Brown Jeffery M, Allouche Abdul-Rahman, Lepine Franck, Compagnon Isabelle**, On-the-fly Femtosecond Action Spectroscopy of Charged Cyanine Dyes: Electronic Structure versus Geometry, **//The journal of physical chemistry letters//**, 2019 * **SchindlerB, Legentil L, Allouche A.R., Ferrières V, Compagnon I.C**, Spectroscopic diagnostic for the ring-size of carbohydrates in the gas phase: furanose and pyranose forms of GalNAc, **//Physical Chemistry Chemical Physics//**, 2019 * **Soury, Raoudha and Chaabene, Marwa and Jabli, Mahjoub and Saleh, Tawfik A and Chaaben, Rafik Ben and Saint-Aman, Eric and Loiseau, Frédérique and Philouze, Christain and Allouche, Abdul-Rahman and Nasri, Habib**, Meso-tetrakis (3, 4, 5-trimethoxyphenyl) porphyrin derivatives: Synthesis, spectroscopic characterizations and adsorption of NO2, **//Chemical Engineering Journal//**, 2019 * **Abdelaziz, Moussaoui and Kamel, Alioua and Abdul-rahman, Allouche and Moncef, Bouledroua**, Theoretical investigation of the pressure broadening D1 and D2 lines of cesium atoms colliding with ground-state helium atoms, **//Chinese Physics B//**, 2019 * **C. Herbert, R. Caballero and F. Bouchet**, Atmospheric bistability and abrupt transitions to superrotation: wave-jet resonance and Hadley cell feedbacks, **//Journal of the Atmospheric Sciences//**, vol. 77, no. 1, arXiv:1905.12401, [pdf], https://doi.org/10.1175/JAS-D-19-0089.1 * **F. Ragone and F. Bouchet**, Computation of extremes values of time averaged observables in climate models with large deviation techniques, **//J. Stat. Phys.//**, pp 1–29, arXiv:1907.05762, [pdf], https://doi.org/10.1007/s10955-019-02429-7 * **T. Lestang, F. Bouchet, and E. Lévêque**, Rare-event sampling applied to the simulation of extreme mechanical efforts exerted by a turbulent flow on a bluf body, hal-02347024v1 * **R. Schira, F. Rabilloud**, Localized Surface Plasmon Resonance in Silver Nanoclusters Agn n=20-147, **//J. Phys. Chem. //**C 123, 6205-6212 (2019) * **Renaud, A., Nadeau, L. P., & Venaille, A.**, Periodicity Disruption of a Model Quasibiennial Oscillation of Equatorial Winds. **//Physical Review Letters//**, 122(21), 214504., https://journals.aps.org/prl/pdf/10.1103/PhysRevLett.122.214504 * **Renaud, A., & Venaille, A. **, Boundary streaming by internal waves. **//Journal of Fluid Mechanics//**, 858, 71-90. * **R. D. Schram, A. Rosa, R. Everaers **, Local loop opening in untangled ring polymer melts: A detailed "Feynman test" of models for the large scale structure, **//Soft Matter//** 15, 2418. DOI:10.1039/C8SM02587H * **Fontrodona N, Aubé F, Claude JB, Polvèche H, Lemaire S, Tranchevent LC, Modolo L, Mortreux F, Bourgeois CF, Auboeuf D**, Interplay between coding and exonic splicing regulatory sequences **//Genome Research May 2019//** 29(5):711-722. doi: 10.1101/gr.241315.118. (2019). * **E. Horne, F. Beckebanze, D. Micard, P. Odier, L.R.M. Maas, S. Joubaud**, Particle transport induced by internal wave beam streaming in lateral boundary layers **//Journal of Fluid Mechanics, 870//**, 848-869 (2019). [ImpactFactor: 2.893 | H index:180 | SJR 2017: 1.591] * **A. Rosa, R. Everaers**, Conformational statistics of randomly branching double-folded ring polymers.**//European Physical Journal E 42//**, 7, 2019. [ImpactFactor: 1.802 | H index: 80 | SJR 2017: 0.49] * **Marwa Chaabene, Bouzid Gassoumi, Pierre Mignon, Rafik Ben Chaâbane, Abdul-Rahman Allouche **, New zinc phthalocyanine derivatives for nitrogen dioxide sensors: A theoretical optoelectronic investigation, **//Journal of Molecular Graphics and Modelling//**, 2019, https://doi.org/10.1016/j.jmgm.2019.01.008. [ImpactFactor: 1.885 | H index: 64 | SJR 2017: 0.51] * **Pillet G, Maas L.R.M., Dauxois T. **, Internal wave attractors in 3D geometries : A dynamical systems approach, **//European Journal of Mechanics / B Fluids. 77, 1-16 //**, 2019, https://doi.org/10.1016/j.euromechflu.2019.01.008 [ImpactFactor: 1.885 | H index: 64 | SJR 2017: 0.51] * **Davis G., Dauxois T., Jamin T., Joubaud S. **, Energy budget in internal wave attractor experiments, **//Journal of Fluid Mechanics. 880, 743-763//**, 2019, https://doi.org/10.1017/jfm.2019.741 [ImpactFactor: 1.885 | H index: 64 | SJR 2017: 0.51] ===== 2018 ===== * **Isabella Norrbo, Antton Curutchet, Ari Kuusisto, Jaakko Mäkelä, Pekka Laukkanen, et al..** Solar UV index and UV dose determination with photochromic hackmanites: from the assessment of the fundamental properties to the device. **//Materials Horizons, cRoyal Society of Chemistry//**, 2018, 5 (3), pp.569 - 576. ⟨10.1039/C8MH00308D⟩. ⟨hal-01889515⟩ * **F. RAGONE, J. WOUTERS, and F. BOUCHET**, Computation of extreme heat waves in climate models using a large deviation algorithm, **//Proceedings of the National Academy of Sciences//**, vol 115, no 1, pages 24-29, https://doi.org/10.1073/pnas.1712645115, and arXiv:1709.03757, [pdf]. * **F. BOUCHET, J. MARSTON, and T. TANGARIFE**, Fluctuations and large deviations of Reynolds' stresses in zonal jet dynamics, **//Physics of Fluids//** 30, 015110, https://doi.org/10.1063/1.4990509, and arXiv:1706.08810, [pdf]. * **T. LESTANG, F. RAGONE, C.E. BREHIER, C. HERBERT, and F. BOUCHET**, Computing return times with rare event algorithms, **//Journal of Statistical Mechanics: Theory and Experiment//**, 2018, vol. 2018, no 4, p. 043213, https://doi.org/10.1088/1742-5468/aab856, arXiv:1709.03757, [pdf] * **Staub, Ruben; Iannuzzi, Marcella; Khaliullin, Rustam Z; Steinmann, Stephan N**, Energy Decomposition Analysis for Metal Surfaceâ Adsorbate Interactions by Block Localized Wave Functions, **//Journal of chemical theory and computation//**,15,1,265-275,2018,American Chemical Society * **S. Mahtout, C. Siouani, F. Rabilloud**, Growth behavior and electronic structure of noble metal-doped germanium clusters, **//J. Phys. Chem.//** A 122, 662-677 (2018) * **C Hocquet, X Robellet, L Modolo, X-M Sun, C Burny, S Cuylen-Haering, E Toselli, S Clauder-Münster, L Steinmetz, Ch H Haering, S Marguerat and P Bernard**, Condensin controls cellular RNA levels through the accurate segregation of chromosomes instead of directly regulating transcription, **//eLife 2018//**, Published online 2018 Sep 19. doi: 10.7554/eLife.38517 (2018). * **T Dauxois, S Joubaud, P Odier, A Venaille**, Instabilities of Internal Gravity Waves, **//Annual Review of Fluid Mechanics, 50//**, 131-156 (2018). [ImpactFactor: 14.814 | H index:150 | SJR 2017: 5.943] * **S Nasraoui, NB Brahim, NBH Mohamed, RB Chaabane, AR Allouche **, Theoretical and experimental investigation on ligands-CdS clusters interactions: Influence of solvent, **//Journal of Molecular Structure 1173//**, 894-902 2018. [ImpactFactor: 2.011 | H index: 84 | SJR 2017: 0.41] * **Abdelhakim Meziani, Lemia Semra, Azzedine Telia, Hilmi Ünlü, Abdul-Rahman Allouche **, Structural and electronic properties of wurtzite, zincblende and rocksalt Al1 − xInxN ternary alloys at ambient and high pressure, **//Phase Transitions 91 (12)//**, 1232-1245 2018. [ImpactFactor: 1.028 | H index: 37 | SJR 2017: 0.23] * **Baptiste Schindler, Gabrielle Laloy-Borgna, Loic Barnes, Abdul-Rahman Allouche, Elodie Bouju, Vincent Dugas, Claire Demesmay, Isabelle Compagnon **, Online Separation and Identification of Isomers Using Infrared Multiple Photon Dissociation Ion Spectroscopy Coupled to Liquid Chromatography: Application to the Analysis of … **//Analytical chemistry 90 (20)//**, 11741-11745 2018. [ImpactFactor: 6.042 | H index: 295 | SJR 2017: 2.36] * **R. Schira, F. Rabilloud**, Effects of the Rare-Gas Matrices on the Optical Response of Silver Nanoclusters, **//J. Phys. Chem. C 122//**, 27656-27661 2018. [ImpactFactor: 4.484 | H index: 222 | SJR 2017: 2.14] * **C. Yu, R. Schira, H. Brune, B. v. Issendorff, R. Schira, F. Rabilloud, W. Harbich**, Optical properties of size selected neutral Ag clusters: from molecular transitions to plasmons, **//Nanoscale, 10//**, 20821-20827 2018. [ImpactFactor: 3.125 | H index: 152 | SJR 2017: 2.93] * **S. Mahtout, C. Siouani, F. Rabilloud**, Growth behavior and electronic structure of noble metal-doped germanium clusters,**//J. Phys. Chem A 122//**, 662-677 2018. [ImpactFactor: 2.836 | H index: 205 | SJR 2017: 1.17] * **Jason Reneuve, Julien Salort, and Laurent Chevillard**. Structure, dynamics, and reconnection of vortices in a nonlocal model of superfluids. **//Phys. Rev. Fluids 3, 114602//**, 8 November 2018. [ImpactFactor: | H index: 6 | SJR 2017: 1.69] * **Isabella Norrbo, Antton Curutchet, Ari Kuusisto, Jaakko Mäkelä, Pekka Laukkanen, et al.**. Solar UV index and UV dose determination with photochromic hackmanites: from the assessment of the fundamental properties to the device. **//Materials Horizons, cRoyal Society of Chemistry//**, 2018, 5 (3), pp.569 - 576. 〈10.1039/C8MH00308D〉. 〈hal-01889515〉. [ImpactFactor: 13.183 | H index: 38 | SJR 2017: 5.03] * **Maykon Lemes, Hilarie Stein, Bulat Gabidullin, Stephan N. Steinmann, Muralee Murugesu **. Tetrazine-Based Ligand Transformation Driving Metal–Metal Bond and Mixed-Valence Hg I /Hg II **//ACS Omega, ACS Publications,//**2018, 3 (8), pp.10273 - 10277. 〈10.1021/acsomega.8b01861〉. [ImpactFactor: | H index: 7 | SJR 2017: 0.75] * **Indira Thapa, Spyridon Ntais, Roxanne Clément, Elena Baranova, Qingyi Gu et al. **.C6 Diacids from homocitric acid lactone using relay heterogeneous catalysis in water **//Catalysis Today, Elsevier,//**2018 〈10.1016/j.cattod.2018.08.002〉. [ImpactFactor: 4.667 | H index: 181 | SJR 2017: 1.35] * **Xiaobo Li, Sigismund Melissen, Tangui Le Bahers, Philippe Sautet, Anthony Masters et al. **. Shining Light on Carbon Nitrides: Leveraging Temperature To Understand Optical Gap Variations **//Chemistry of Materials, American Chemical Society,//**2018, 30 (13), pp.4253 - 4262. 〈10.1021/acs.chemmater.8b00740〉. [ImpactFactor: 9.89 | H index: 320 | SJR 2017: 4.67] * **Emanuele Vignola, Stephan N. Steinmann, Katell Le Mapihan, Bart Vandegehuchte, Daniel Curullaet al. **. Acetylene Adsorption on Pd–Ag Alloys: Evidence for Limited Island Formation and Strong Reverse Segregation from Monte Carlo Simulations **//Journal of Physical Chemistry C, American Chemical Society,//** 2018, 122 (27), pp.15456 - 15463. 〈10.1021/acs.jpcc.8b04108〉. [ImpactFactor: 4.484 | H index: 222 | SJR 2017: 2.14] * **Emanuele Vignola, Stephan N. Steinmann, Ahmad Al Farra, Bart Vandegehuchte, Daniel Curulla et al.**. Evaluating the Risk of C–C Bond Formation during Selective Hydrogenation of Acetylene on Palladium **//ACS Catalysis, American Chemical Society,//** 2018, 8 (3), pp.1662 - 1671. 〈10.1021/acscatal.7b03752〉. [ImpactFactor: 11.38 | H index: 111 | SJR 2017: 4.92] * **Dumon A S, Wang T, Ibañez J, Tomer A, Yan Z, Wischert R, Sautet P, Pera-Titus M & Michel C**. Direct n-octanol amination by ammonia on supported Ni and Pd catalysts: activity is enhanced by "spectator" ammonia adsorbates **//Catalysis Science & Technology, Royal Society of Chemistry,//** 2018, 8, 611-621, [ImpactFactor: 5.365 | H index: 71 | SJR 2017: 1.8] * **Wang T, Yan Z, Michel C, Pera-Titus M & Sautet P**. Trends and Control in the Nitridation of Transition-Metal Surfaces **//ACS Catalysis, American Chemical Society,//** 2018, 8, 63-68. [ImpactFactor: 13.709 | H index: 277 | SJR 2017: 7.2] * **Viola A, Peron J, Kazmierczak K, Giraud M, Michel C, Sicard L, Perret N, Beaunier P, Sicard M, Besson M & Piquemal J-Y**. Unsupported shaped cobalt nanoparticles as efficient and recyclable catalysts for the solvent-free acceptorless dehydrogenation of alcohols **//Catalysis Science & Technology, Royal Society of Chemistry,//** 2018, 8, 562-572, [ImpactFactor: 5.365 | H index: 71 | SJR 2017: 1.8] * **Réocreux R, Jiang T, Iannuzzi M, Michel C & Sautet P**. Structuration and Dynamics of Interfacial Liquid Water at Hydrated γ-Alumina Determined by ab Initio Molecular Simulations: Implications for Nanoparticle Stability **//ACS Applied Nano Materials, American Chemical Society,//** 2018, 1, 191-199. [ImpactFactor: | H index: | SJR 2017: ] * **Steinmann S N, Ferreira de Morais R, Götz A W, Fleurat-Lessard P, Iannuzzi M, Sautet P & Michel C**. A Force Field for Water over Pt (111): Development, Assessment and Comparison **//Journal of Chemical Theory and Computation, American Chemical Society,//** 2018, 14, 3238-3251. [ImpactFactor: 5.399 | H index: 132 | SJR 2017: 2.5] * **Monyoncho E A, Steinmann S N, Sautet P, Baranova E A & Michel C**. Computational screening for selective catalysts: Cleaving the CC bond during ethanol electro-oxidation reaction **//Electrochimica Acta,//** 2018, 274, 274-278. [ImpactFactor: 5.11 | H index: 202 | SJR 2017: 1.44] * **Ruppert A M, Jedrzejczyk M, Potrzebowska N, Kazmierczak K M, Brzezinska M, Sneka O, Sautet P, Keller N, Michel C & Grams J**. Supported gold-nickel nano-alloy as highly efficient catalyst in levulinic acid hydrogenation with formic acid as an internal hydrogen source **//Catalysis Science & Technology, Royal Society of Chemistry,//** 2018, 8, 4318-4331. [ImpactFactor: 1.484 | H index: 64 | SJR 2017: 0.51] * **Sims J J, Ould Hamou C A, Réocreux R, Michel C & Giorgi J B**. Adsorption and Decomposition of Formic Acid on Cobalt (0001) **//The Journal of Physical Chemistry C, American Chemical Society,//** 2018, 122, 20279-20288. [ImpactFactor: 4.885 | H index: 222 | SJR 2017: 2.14] * **Chan K W, Lam E, D ' Anna V, Allouche F, Michel C, Safonova O V, Sautet P & Copéret C ** C-H Activation and Proton Transfer Initiate Alkene Metathesis Activity of the Tungsten (IV)-Oxo Complex **//Journal of the American Chemical Society, American Chemical Society//**. 2018, 140, 11395-11401. [ImpactFactor: 14.357 | H index: 514 | SJR 2017: 8.13] * **Gannouni A, Michel C, Delbecq F, Zina M S & Sautet P ** DFT investigations for the catalytic reaction mechanism of methane combustion occurring on Pd(II)/Al-MCM-41. **//Physical Chemistry Chemical Physics, The Royal Society of Chemistry//**. 2018, 20, 25377-25386. [ImpactFactor: 3.901 | H index: 187 | SJR 2017: 1.69] * **Gu Q, Sautet P & Michel C**. Unraveling the Role of Base and Catalyst Polarization in Alcohol Oxidation on Au and Pt in Water. **//ACS Catalysis//**. 2018 8, 11716-11721. [ImpactFactor: 11.38 | H index: 111 | SJR 2017: 4.92] * **François L, Verdenaud M, Fu X, Ruleman D, Dubois A, Vandenbussche M, Bendahmane A, Raymond O, Just J, Bendahmane M**. A miR172 target-deficient AP2-like gene correlates with the double flower phenotype in roses. **//Scientific reports//**. 2018 Aug 27;8(1):12912. [[https://www.nature.com/articles/s41598-018-30918-4 | DOI: 10.1038/s41598-018-30918-4 ]]. [ImpactFactor: 4.122 | H index: 122 | SJR 2017: 1.533] * **Vigneaux P, Chambon G, Marly A, Luu LH, Philippe P**. Flow of a yield-stress fluid over a cavity: experimental and numerical investigation of a viscoplastic boundary layer. **//Journal of Non-Newtonian Fluid Mechanics//**. 2018 Aug 14. [[https://doi.org/10.1016/j.jnnfm.2018.08.005| DOI: 10.1016/j.jnnfm.2018.08.005 ]]. [ImpactFactor: 2.293 | H index: 89 | SJR 2017: 1.14] * **Raymond O, Gouzy J, Just J, Badouin H, Verdenaud M, Lemainque A, Vergne P, Moja S, Choisne N, Pont C, Carrère S, Caissard J-C, Couloux A, Cottret L, Aury J-M, Szécsi J, Latrasse D, Madoui M-A, François L, Fu X, Yang S-H, Dubois A, Piola F, Larrieu A, Magali Perez M, Karine Labadie K, Lauriane Perrier L, Govetto B, Labrousse Y, Villand P, Bardoux C, Boltz V, Lopez-Roques, Heitzler P, Vernoux T, Vandenbussche M, Quesneville H, Boualem H, Bendahmane A, Liu C, Le Bris M, Salse J, Baudino S, Benhamed M, Wincker P & Bendahmane M**. The Rosa genome provides new insights into the domestication of modern roses. **//Nature Genetics//** 2018 Apr;50,772–777. [[https://www.nature.com/articles/s41588-018-0110-3.pdf| DOI: 10.1038/s41588-018-0110-3 ]]. [ImpactFactor: 27.125 | H index: 511 | SJR 2017: 22.243] * **Pillet G, Ermanyuk E V, Maas L, Sibgatullin I N, Dauxois T**. Internal Wave Attractors in 3D Geometries : trapping by oblique reflection. **//Journal of Fluid Mechanics, 845, 203-225 //**. 2018. [[https://www.cambridge.org/core/services/aop-cambridge-core/content/view/7AF178AA1D0E9AE4EDE6EF87C4DAB893/S0022112018002367a_hi.pdf/_div_class__title__Internal_wave_attractors_in_three-dimensional_geometries__trapping_by_oblique_reflection__div_.pdf|DOI: 10.1017/jfm.2018.236 ]]. [ImpactFactor: 2.821 | H index: 170 | SJR 2016: 1.671] * **Richard M, Chuffart F, Duplus‐Bottin H, Pouyet F, Spichty M, Fulcrand E, Entrevan M, Barthelaix A, Springer M, Jost D, Yvert G**. Assigning function to natural allelic variation via dynamic modeling of gene network induction. **//Molecular systems biology//**. 2018 Jan 1;14(1):e7803. [[http://msb.embopress.org/content/14/1/e7803|DOI: 10.15252/msb.20177803 ]]. [ImpactFactor: 9.75 | H index: 113 | SJR 2016: 8.366] * **Loisy A, Naso A, Spelt PD.** The effective diffusivity of ordered and freely evolving bubbly suspensions. **//Journal of Fluid Mechanics//**. 2018 Apr;840:215-37. [[https://doi.org/10.1017/jfm.2018.84| DOI:10.1017/jfm.2018.84]]. [ImpactFactor: 2.821 | H index: 170 | SJR 2016: 1.671] * **Vallefuoco D, Naso A, Godeferd FS.** Small-scale anisotropy induced by spectral forcing and by rotation in non-helical and helical turbulence. **//Journal of Turbulence//**. 2018 Feb 1;19(2):107-40. [[https://doi.org/10.1080/14685248.2017.1400667|DOI:10.1080/14685248.2017.1400667]] | [[https://arxiv.org/pdf/1706.00651.pdf|PDF]]. [ImpactFactor: 1.417 | H index: 37 | SJR 2016: 0.809] * **Jucha J, Naso A, Lévêque E, Pumir A.** Settling and collision between small ice crystals in turbulent flows. **//Physical Review Fluids//**. 2018 Jan 11;3(1):014604. [[https://journals.aps.org/prfluids/abstract/10.1103/PhysRevFluids.3.014604|DOI:10.1103/PhysRevFluids.3.014604 ]] | [[https://hal.archives-ouvertes.fr/hal-01547447/document|PDF]]. [ImpactFactor: | H index: 6 | SJR 2017: 1.69] ==== 2017 ==== * **Kiss A, Moreau T, Mirabet V, Calugaru C. I, Boudaoud A & Das P **, //Segmentation of 3D images of plant tissues at multiple scales using the level set method//, Plant Methods, 2017 Dec 21; 13, 114, https://doi.org/10.1186/s13007-017-0264-5 \\ * **Amal Baqais, Antton Curutchet, Ahmed Ziani, Hassan Ait Ahsaine, Philippe Sautet, et al..** Bismuth Silver Oxysulfide for Photoconversion Applications: Structural and Optoelectronic Properties. **//Chemistry of Materials, American Chemical Society//**, 2017, 29 (20), pp.8679 - 8689. ⟨10.1021/acs.chemmater.7b02664⟩. ⟨hal-01889549⟩ * **O. Liot, Q. Ehlinger, E. Rusaouën, T. Coudarchet, J. Salort and F. Chillà**, Velocity fluctuations and boundary layer structure in a rough Rayleigh-Bénard cell filled with water, **//Phys. Rev. Fluids//**, 2, 044605 (2017) http://dx.doi.org/10.1103/PhysRevFluids.2.044605 * **Santos, M. E., A. Le Bouquin, A. J. J. Crumière, and A. Khila**. Taxon-restricted genes at the origin of a novel trait allowing access to a new environment. **//Science (80-. )//**. 2017, 358:386–390. * **Amal Baqais, Antton Curutchet, Ahmed Ziani, Hassan Ait Ahsaine, Philippe Sautet, et al.**. Bismuth Silver Oxysulfide for Photoconversion Applications: Structural and Optoelectronic Properties. **//Chemistry of Materials, American Chemical Society//**, 2017, 29 (20), pp.8679 - 8689. 〈10.1021/acs.chemmater.7b02664〉. 〈hal-01889549〉 * **Sheikha Lardhi, Antton Curutchet, Luigi Cavallo, Moussab Harb, Tangui Le Bahers.**. Ab initio assessment of Bi 1−x RE x CuOS (RE = La, Gd, Y, Lu) solid solutions as a semiconductor for photochemical water splitting.**// Physical Chemistry Chemical Physics, Royal Society of Chemistry//**, 2017, 19 (19), pp.12321 - 12330. 〈10.1039/c7cp01684k〉. 〈hal-01889554〉 * **Dossmann Y, Pollet F, Odier P, Dauxois T**. Mixing and formation of layers by internal wave forcing. **//Journal of Geophysical Research: Oceans//**. 122, 9906-9917 2017. [[https://agupubs.onlinelibrary.wiley.com/doi/full/10.1002/2017JC013309|DOI: 10.1002/2017JC013309 ]] , [ImpactFactor: | H index: 280 | SJR 2016: 2.117] * **Brouzet C, Sibgatullin IN, Ermanyuk EV, Joubaud S, Dauxois T**. Scale effects in internal wave attractors. **//Physical Review Fluids//**. 2017 Nov 17;2(11):114803. [[http://perso.ens-lyon.fr/thierry.dauxois/PAPERS/PhysRevFluids.2.114803.2017.pdf|DOI: 10.1103/PhysRevFluids.2.114803
 ]] * **Brouzet C, Ermanyuk EV, Moulin M, Pillet G, Dauxois T**. Added mass: a complex facet of tidal conversion at finite depth. **//Journal of Fluid Mechanics//**. 2017 Nov;831:101-27. [[https://www.cambridge.org/core/services/aop-cambridge-core/content/view/3251CC239F5675BC973C5A769A8E198A/S0022112017006164a_hi.pdf/_div_class__title__Added_mass__a_complex_facet_of_tidal_conversion_at_finite_depth__div_.pdf|DOI: 10.1017/jfm.2017.616]] , [ImpactFactor: 2.181 | H index: 170 | SJR 2016: 1.671] * **Brouzet C, Ermanyuk E, Joubaud S, Pillet G, Dauxois T**. Internal wave attractors: different scenarios of instability. **//Journal of Fluid Mechanics//**. 2017 Jan;811:544-68. [[https://www.cambridge.org/core/services/aop-cambridge-core/content/view/25DA2E55BF27E607F701E7568EE87803/S002211201600759Xa.pdf/internal_wave_attractors_different_scenarios_of_instability.pdf|DOI: 10.1017/jfm.2016.759 ]] , [ImpactFactor: 2.181 | H index: 170 | SJR 2016: 1.671] * ** Maurer P, Ghaemsaidi SJ, Joubaud S, Peacock T, Odier P**. An axisymmetric inertia-gravity wave generator. **//Experiments in Fluids//**. 2017 Oct 1;58(10):143. [[https://link.springer.com/article/10.1007/s00348-017-2423-x|DOI: 10.1007/s00348-017-2423-x ]] , [ImpactFactor: 1.832 | H index: 91 | SJR 2016: 0.994] * **Schindler B, Barnes L, Renois G, Gray C, Chambert S, Fort S, Flitsch S, Loison C, Allouche AR, Compagnon I**. Anomeric memory of the glycosidic bond upon fragmentation and its consequences for carbohydrate sequencing. **//Nature communications//**. 2017 Oct 17;8(1):973. [[https://www.nature.com/articles/s41467-017-01179-y|DOI: 10.1038/s41467-017-01179-y ]] , [ImpactFactor: 12.124 | H index: 169 | SJR 2016: 6.399] * **Barnes L, Schindler B, Chambert S, Allouche AR, Compagnon I**. Conformational preferences of protonated N-acetylated hexosamines probed by infrared multiple photon dissociation (IRMPD) spectroscopy and ab initio calculations. **//International Journal of Mass Spectrometry//**. 2017 Oct 1;421:116-23. [[https://www.sciencedirect.com/science/article/pii/S1387380617301203|DOI: 10.1016/j.ijms.2017.05.005 ]] , [ImpactFactor: 1.702 | H index: 97 | SJR 2016: 0.69] * **Gray CJ, Schindler B, Migas LG, Pičmanová M, Allouche AR, Green AP, Mandal S, Motawia MS, Sánchez-Pérez R, Bjarnholt N, Møller BL**. Bottom-up elucidation of glycosidic bond stereochemistry. **//Analytical chemistry//**. 2017 Apr 6;89(8):4540-9. [[https://pubs.acs.org/doi/full/10.1021/acs.analchem.6b04998|DOI: 10.1021/acs.analchem.6b04998 ]] , [ImpactFactor: 6.32 | H index: 286 | SJR 2016: 2.255] * **Gu GH, Schweitzer B, Michel C, Steinmann SN, Sautet P, Vlachos DG**. Group Additivity for Aqueous Phase Thermochemical Properties of Alcohols on Pt (111). **//Journal of Physical Chemistry C//**. 2017 Sep 26;121(39):21510-9. [[https://pubs.acs.org/doi/10.1021/acs.jpcc.7b07340|DOI: 10.1021/acs.jpcc.7b07340]] , [ImpactFactor: 4.536 | H index: 206 | SJR 2016: 1.948] * **Schindler B, Renois-Predelus G, Bagdadi N, Melizi S, Barnes L, Chambert S, Allouche AR**, Compagnon I. MS/IR, a new MS-based hyphenated method for analysis of hexuronic acid epimers in glycosaminoglycans. **//Glycoconjugate journal//**. 2017 Jun 1;34(3):421-5. [[https://link.springer.com/article/10.1007/s10719-016-9741-8|DOI: 10.1007/s10719-016-9741-8 ]] , [ImpactFactor: 2.186 | H index: 76 | SJR 2016: 0.609] * **Siouani C, Mahtout S, Safer S, Rabilloud F**. Structure, Stability, and Electronic and Magnetic Properties of VGen (n= 1–19) Clusters. **//Journal of Physical Chemistry A//**. 2017 Apr 28;121(18):3540-54. [[https://pubs.acs.org/doi/full/10.1021/acs.jpca.7b00881|DOI: 10.1021/acs.jpca.7b00881 ]] , [ImpactFactor: 2.847 | H index: 196 | SJR 2016: 1.258] * **Mahtout S, Siouani C, Rabilloud F**. Growth Behavior and Electronic Structure of Noble Metal-Doped Germanium Clusters. **//Journal of Physical Chemistry A//**. 2017 Dec. [[https://pubs.acs.org/doi/abs/10.1021/acs.jpca.7b09887|DOI: 10.1021/acs.jpca.7b09887 ]] , [ImpactFactor: 2.847 | H index: 196 | SJR 2016: 1.258] * ** Mahtout S, Amatousse N, Rabilloud F**. Structural, electronic and magnetic properties of Pn+ 1 and FePn (n= 1–14) clusters. **//Computational and Theoretical Chemistry//**. 2017 Dec 15;1122:16-26. [[https://doi.org/10.1016/j.comptc.2017.10.010|DOI: 10.1016/j.comptc.2017.10.010 ]] , [ImpactFactor: 1.549 | H index: 75 | SJR 2016: 0.541] * **Rahmouni S, Djedouani A, Anak B, Tabti S, Bendaas A, Bencharif M, François M, Fleutot S, Rabilloud F**. Synthesis, X-ray crystal structures, electrochemistry and theoretical investigation of a tetradentate nickel and copper Schiff base complexes. **//Journal of Molecular Structure//**. 2017 Nov 15;1148:238-46. [[http://www.sciencedirect.com/science/article/pii/S0022286017309651|DOI: 10.1016/j.molstruc.2017.07.032 ]] , [ImpactFactor: 1.753 | H index: 82 | SJR 2016: 0.401] * **Besnard F, Koutsovoulos G, Dieudonné S, Blaxter M, Félix MA**. Toward Universal Forward Genetics: Using a Draft Genome Sequence of the Nematode Oscheius tipulae To Identify Mutations Affecting Vulva Development. **//Genetics//**. 2017 Aug 1;206(4):1747-61. [[http://www.genetics.org/content/206/4/1747|DOI: 10.1534/genetics.117.203521]], [ImpactFactor: 4.556 | H index: 213 | SJR 2016: 3.837] * **Gustavsson K, Jucha J, Naso A, Lévêque E, Pumir A, Mehlig B**. Statistical Model for the Orientation of Nonspherical Particles Settling in Turbulence. **//Physical review letters//**. 2017 Dec 19;119(25):254501. [[https://journals.aps.org/prl/abstract/10.1103/PhysRevLett.119.254501|DOI: 10.1103/PhysRevLett.119.254501 ]] | [[https://journals.aps.org/prl/pdf/10.1103/PhysRevLett.119.254501|PDF ]] , [ImpactFactor: 8.462 | H index: 504 | SJR 2016: 3.56] * **Loisy A, Naso A**. Interaction between a large buoyant bubble and turbulence. **//Physical Review Fluids//**. 2017 Jan 25;2(1):014606. [[https://journals.aps.org/prfluids/abstract/10.1103/PhysRevFluids.2.014606|DOI: 10.1103/PhysRevFluids.2.014606 ]] | [[ https://hal.archives-ouvertes.fr/hal-01346796/document|PDF]] * **Loisy A, Naso A, Spelt PD**. Buoyancy-driven bubbly flows: ordered and free rise at small and intermediate volume fraction. **//Journal of Fluid Mechanics//**. 2017 Apr;816:94-141. [[https://doi.org/10.1017/jfm.2017.64|DOI:10.1017/jfm.2017.64 ]], [ImpactFactor: 2.821 | H index: 170 | SJR 2016: 1.671] * **Bignon E, Dršata T, Morell C, Lankaš F, Dumont E**. Interstrand cross-linking implies contrasting structural consequences for DNA: insights from molecular dynamics. **//Nucleic acids research//**. 2016 Dec 16;45(4):2188-95. [[https://doi.org/10.1093/nar/gkw1253 |DOI: 10.1093/nar/gkw1253 ]] | [[ |PDF ]], [ImpactFactor: 10.162 | H index: 414 | SJR 2016: 7.397] * **Morin, A., Lopes Cardozo, D., Chikkadi, V. and Bartolo, D.**, 2017. Diffusion, subdiffusion, and localization of active colloids in random post lattices. **//Physical Review E//**, 96(4), p.042611. [[https://journals.aps.org/pre/abstract/10.1103/PhysRevE.96.042611 |DOI:10.1103/PhysRevE.96.042611]], [ImpactFactor: | H index: 193 | SJR 2016: 0.993] * **Bouffard, M., Labrosse, S., Choblet, G., Fournier, A., Aubert, J. and Tackley, P.J.**, 2017. A particle-in-cell method for studying double-diffusive convection in the liquid layers of planetary interiors. **//Journal of Computational Physics//**, 346, pp.552-571. [[http://www.sciencedirect.com/science/article/pii/S0021999117304734|DOI:10.1016/j.jcp.2017.06.028]], [ImpactFactor: 2.744 | H index: 196 | SJR 2016: 2.034] * **Flottat, T., de Parny, L.D.F., Hébert, F., Rousseau, V.G. and Batrouni, G.G.,**, 2017. Phase diagram of bosons in a two-dimensional optical lattice with infinite-range cavity-mediated interactions. **//Physical Review B//**, 95(14), p.144501. [[https://journals.aps.org/prb/abstract/10.1103/PhysRevB.95.144501|DOI:10.1103/PhysRevB.95.144501]], [ImpactFactor: 3.718 | H index: 327 | SJR 2015: 1.933] * **Loisy, A., Naso, A. and Spelt, P.D.**, 2017. Buoyancy-driven bubbly flows: ordered and free rise at small and intermediate volume fraction. **//Journal of Fluid Mechanics//**, 816, pp.94-141. [[https://www.cambridge.org/core/journals/journal-of-fluid-mechanics/article/div-classtitlebuoyancy-driven-bubbly-flows-ordered-and-free-rise-at-small-and-intermediate-volume-fractiondiv/9F72E070E1744AADD207737B6DDC32EB|DOI:10.1017/jfm.2017.64]], [ImpactFactor: 2.514 | H index: 155 | SJR 2015: 1.45] * **Rosa, A. and Everaers, R.**, 2017. Beyond Flory theory: Distribution functions for interacting lattice trees. **//Physical Review E//**, 95(1), p.012117. [[https://journals.aps.org/pre/abstract/10.1103/PhysRevE.95.012117|DOI:10.1103/PhysRevE.95.012117]] , [ImpactFactor: 2.288 | H index: 177 | SJR 2015: 0.999] * **Pantalacci, S., Guéguen, L., Petit, C., Lambert, A., Peterkovà, R. and Sémon, M.**, 2017. Transcriptomic signatures shaped by cell proportions shed light on comparative developmental biology. **//Genome Biology//**, 18(1), p.29 [[https://genomebiology.biomedcentral.com/articles/10.1186/s13059-017-1157-7 | DOI:10.1186/s13059-017-1157-7]], [ImpactFactor: 11.3 | H index: 168 | SJR 2015: 9.86] * **de Parny, L.D.F. and Rousseau, V.G.**, 2017. Quantum and thermal phase transitions in a bosonic atom-molecule mixture in a two-dimensional optical lattice. **//Physical Review A//**, 95(1), p.013606. [[https://journals.aps.org/pra/abstract/10.1103/PhysRevA.95.013606| DOI:10.1103/PhysRevA.95.013606]], [ImpactFactor: 2.765 | H index: 197 | SJR 2015: 1.418] * **Steinmann, S.N., Melissen, S.T., Le Bahers, T. and Sautet, P.**, 2017. Challenges in calculating the bandgap of triazine-based carbon nitride structures. **//Journal of Materials Chemistry A//**, 5(10), pp.5115-5122. [[http://pubs.rsc.org/en/Content/ArticleLanding/2017/TA/C6TA08939A#!divAbstract|DOI:10.1039/C6TA08939A]], [ImpactFactor: 8.262 | H index: 61 | SJR 2015: 2.77] * **Curutchet, A. and Le Bahers, T.**, 2017. Modeling the Photochromism of S-Doped Sodalites Using DFT, TD-DFT, and SAC-CI Methods. **//Inorganic Chemistry//**. 56, pp414-423. [[http://pubs.acs.org/doi/abs/10.1021/acs.inorgchem.6b02323 | DOI:10.1021/acs.inorgchem.6b02323]], [ImpactFactor: 4.82 | H index: 182 | SJR 2015: 1.873] * **Grigorio, L.S., Bouchet, F., Pereira, R.M. and Chevillard, L.**, 2017. Instantons in a Lagrangian model of turbulence. **//Journal of Physics A: Mathematical and Theoretical//**, 50(5), p.055501. [[http://iopscience.iop.org/article/10.1088/1751-8121/aa51a3/meta| DOI:10.1088/1751-8121/aa51a3]] and arXiv:1608.07332(2016). [ImpactFactor: 1.933 | H index: 106 | SJR 2015: 0.881] * **Marly, A. and Vigneaux, P.**, 2017. Augmented Lagrangian simulations study of yield-stress fluid flows in expansion-contraction and comparisons with physical experiments. **//Journal of Non-Newtonian Fluid Mechanics//**, 239, pp.35-52. [[http://www.sciencedirect.com/science/article/pii/S037702571630221X| DOI:10.1016/j.jnnfm.2016.12.004]], [ImpactFactor: 2.172 | H index: 77 | SJR 2015: 1.134] * **Calle-Vallejo, F., Pohl, M.D., Reinisch, D., Loffreda, D., Sautet, P. and Bandarenka, A.S.**, 2017. Why conclusions from platinum model surfaces do not necessarily lead to enhanced nanoparticle catalysts for the oxygen reduction reaction. **//Chemical Science//**, 8 p. 2283. [[http://pubs.rsc.org/en/content/articlepdf/2017/sc/c6sc04788b|DOI:10.1039/c6sc04788b]], [ImpactFactor: 9.144 | H index: 79 | SJR 2015: 7.974] * **Schindler, B., Barnes, L., Gray, C.J., Chambert, S., Flitsch, S.L., Oomens, J., Daniel, R., Allouche, A.R. and Compagnon, I.**, 2017. IRMPD Spectroscopy Sheds New (InfraRed) Light on the Sulfate Pattern of Carbohydrates. **//Journal of Physical Chemistry A//**. [[http://pubs.acs.org/doi/abs/10.1021/acs.jpca.6b11642 | DOI:10.1021/acs.jpca.6b11642]] [ImpactFactor: 2.2883 | H index: 186 | SJR 2015: 1.231] * **Loisy A, Naso A.**, 2017 Interaction between a large buoyant bubble and turbulence. **//Physical Review Fluids//**, 2. [[http://journals.aps.org/prfluids/abstract/10.1103/PhysRevFluids.2.014606|DOI:10.1103/PhysRevFluids.2.014606]] ==== 2016 ==== * **Stéphanie Dord-Crouslé**, //Les “seconds volumes” possibles de Bouvard et Pécuchet : l’avènement d’un lecteur-auteur ?//, Dominique Pety. //Patrimoine littéraire en ligne : la renaissance du lecteur ?//, Éditions de l'université de Savoie, pp.117-131, 2016, Corpus, 978-2-919732-44-9. http://www.llseti.univ-smb.fr/web/llseti/572-patrimoine-litteraire-en-ligne-la-renaissance-du-lecteur.php. \\ * **Stéphanie Dord-Crouslé**, //L’avenir de l’humanité selon Bouvard et Pécuchet. Le XIXe siècle face au futur. Penser, représenter, rêver l’avenir au XIXe siècle//, Jan 2016, Paris, France. http://www.singer-polignac.org/fr/missions/sciences/colloques/1279-le-xixe-siecle-face-au-futur-penser-representer-rever-l-avenir-au-xixe-siecle. \\ * **Stéphanie Dord-Crouslé**, //La correspondance entre Bouilhet et Flaubert, à partir de L’Éducation sentimentale – et au-delà….// Vanessa Guignery. Crossed Correspondences: Writers as Readers and Critics of their Peers, Cambridge Scholars Publishing, pp.196-214, 2016, 978-1-4438-8699-4. http://www.cambridgescholars.com/crossed-correspondences. \\ * **Anne Verjus**, //Le privé est politique : une preuve par les sources//, in Laurent Le Gall et Anne de Mathan, //Voix et voies de la mémoire : des mots, des hommes et des femmes//, Rennes, PUR (à paraître 2016). \\ * **Anne Verjus**, //Combien les demoiselles sont difficiles à marier ! Le choix du conjoint dans les mariages arrangés au temps du Code civil//, in Stéphane Gougelmann, François Kerlouégan et Anne Verjus,// Ecrire le mariage des lendemains de la Révolution à la Belle Epoque//. Discours, idéologies, représentations, Presses universitaires de Saint-Etienne (à paraître 2016). \\ ==== 2015 ==== * **Anne Verjus**, //Belle-mère et belle-fille, entre rivalité et complicité//, in Yannick Ripa (dir.), //L’étonnante histoire des belles-mères//, Paris, Belin, 2015. \\ ==== 2013 ==== * **Meyer Sam ; Jost Daniel ; Theodorakopoulos ; Peyrard Michel ; Lavery Richard ; Everaers Ralf**, //[[ http://www.sciencedirect.com/science/article/pii/S0006349513010229|Temperature Dependence of the DNA Double Helix at the Nanoscale: Structure, Elasticity, and Fluctuations]] //, Biophysical Journal, Volume: 105, Issue: 8, Pages: 1904-1914, October 15 2013 * **Potestio, Raffaello ; Fritsch, Sebastian ; Espanol, Pep ; Delgado-Buscalioni, Rafael ; Kremer, Kurt ; Everaers Ralf ; Donadio, Davide**, // [[http://journals.aps.org/prl/abstract/10.1103/PhysRevLett.111.060601|Monte Carlo Adaptive Resolution Simulation of Multicomponent Molecular Liquids]] //, Physical review letters, Volume: 111, Issue: 6, Article Number: 060601, August 8 2013 * **Potestio, Raffaello ; Fritsch, Sebastian ; Espanol, Pep ; Delgado-Buscalioni, Rafael ; Kremer, Kurt ; Everaers Ralf ; Donadio, Davide**, // H-AdResS: A Hamiltonian method for adaptive resolution simulations //, Abstracts of papers of the American Chemical Society, Volume: 245, Meeting Abstract: 132-COMP, April 7 2013 * **Potestio, Raffaello ; Fritsch, Sebastian ; Espanol, Pep ; Delgado-Buscalioni, Rafael ; Kremer, Kurt ; Everaers Ralf ; Donadio, Davide**, //[[http://journals.aps.org/prl/abstract/10.1103/PhysRevLett.110.108301|Hamiltonian Adaptive Resolution Simulation for Molecular Liquids]]//, Physical review letters, Volume: 110, Issue: 10, Article Number: 108301, March 5 2013 * **Anne Verjus**,// Etre père et mari sous la Révolution française//, in Orages, 2013. * **Denise Davidson et Anne Verjus**, //Generational Conflict in Revolutionary France : Widows, Inheritance Practices, and the "Victory of Sons//, in The William and Mary Quarterly, 2013. * **M. Potters, T. Vaillant, F. Bouchet**, //Sampling microcanonical measures of the 2D Euler equations using Creutz’s algorithm: a phase transition from disorder to order when energy is increased//, in press J. Stat. Mech. 2013 {{:sidus.png?100 |}}[[http://succes2013.sciencesconf.org/|Journées Succes 2013 - Présentation de SIDUS : outil de reproductibilité]] \\ **November 14, 2013**, à l'[[http://www.ipgp.fr/|INPG]] par [[ressources:informatique|Emmanuel Quemener]]\\ [[http://succes2013.sciencesconf.org/24312/document|article]], [[http://succes2013.sciencesconf.org/conference/succes2013/Succes_20131114_EQ.pdf|transparents]] et [[http://webcast.in2p3.fr/videos-JSFG2013_sidius|vidéo]] \\ \\ {{:cover235linuxmag.jpg?100 |}}First international publication on SIDUS in [[http://www.linuxjournal.com/content/november-2013-issue-linux-journal-system-administration|Linux Journal]] by E. Quemener & M. Corvellec: SIDUS, a unique system that drastically reduces maintenance and installation time for new computer workstations. Tiny errata available in [[developpement:productions:sidus4lj|French]] & [[en:developpement:productions:sidus4lj|English]]. \\ \\ \\ \\ \\ \\ ==== 2012 ==== * **Anne Verjus**, //Une informalité ordonnée : les « dîners de veuve » du couple Morand de Jouffrey//, in Laurent Le Gall, Michel Offerlé, François Ploux (dir.), //La politique sans en avoir l’air. Aspects de la politique informelle XIXe-XXIe siècle//, Rennes, Presses Universitaires de Rennes, pp. 209-224, 2012. * **M. Champion, A. Alastuey, T. Dauxois an S. Ruffo**, //[[http://arxiv.org/abs/1210.5592|Gravitation in the microcanonical ensemble: Appropriate scaling leading to extensivity and thermalization]]//, submitted to J. Stat. Phys. (2012), arXiv:1210.5592. * **Everaers, Ralf**,//[[http://pre.aps.org/abstract/PRE/v86/i2/e022801|Topological versus rheological entanglement length in primitive-path analysis protocols, tube models, and slip-link models]]//, PHYSICAL REVIEW E Volume: 86 Issue: 2 Article Number: 022801 DOI: 10.1103/PhysRevE.86.022801 Part 1, August 13, 2012 \\ * **Gupta, Shamik; Potters, Max; Ruffo, Stefano**, //One-dimensional lattice of oscillators coupled through power-law interactions: Continuum limit and dynamics of spatial Fourier modes//, PHYSICAL REVIEW E Volume: 85 Issue: 6 Article Number: 066201 DOI: 10.1103/PhysRevE.85.066201 Part 2, June 4, 2012 * **Bouchet, Freddy; Venaille, Antoine**, //[[http://www.sciencedirect.com/science/article/pii/S0370157312000518|Statistical mechanics of two-dimensional and geophysical flows]]//, PHYSICS REPORTS-REVIEW SECTION OF PHYSICS LETTERS Volume: 515 Issue: 5 Pages: 227-295 DOI: 10.1016/j.physrep.2012.02.001, June 2012 * **de Buyl, Pierre; Fanelli, Duccio; Ruffo, Stefano**, //[[http://link.springer.com/article/10.2478%2Fs11534-012-0010-6|Phase transitions of quasistationary states in the Hamiltonian Mean Field model]]//, CENTRAL EUROPEAN JOURNAL OF PHYSICS Volume: 10 Issue: 3 Pages: 652-659 DOI: 10.2478/s11534-012-0010-6, June 2012 * **Magi, Alberto; Tattini, Lorenzo; Benelli, Matteo; et al.**, //[[http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0038767|WNP: a novel algorithm for gene products annotation from weighted functional networks]]//, PloS one Volume: 7 Issue: 6 Pages: e38767 DOI: 10.1371/journal.pone.0038767, (2012) Epub June 28, 2012 * **Bouchet, Freddy; Touchette, Hugo**, //[[http://arxiv.org/abs/1204.6269|Non-classical large deviations for a noisy system with non-isolated attractors]]//, JOURNAL OF STATISTICAL MECHANICS-THEORY AND EXPERIMENT Article Number: P05028 DOI: 10.1088/1742-5468/2012/05/P05028, May 2012 * **Patelli, Aurelio; Gupta, Shamik; Nardini, Cesare; et al.**, //[[http://arxiv.org/abs/1112.1079|Linear response theory for long-range interacting systems in quasistationary states]]//, PHYSICAL REVIEW E Volume: 85 ssue: 2 Article Number: 021133 DOI: 10.1103/PhysRevE.85.021133 Part 1, February 23, 2012 * **Nardini, Cesare; Gupta, Shamik; Ruffo, Stefano; et al.**, //[[http://iopscience.iop.org/1742-5468/2012/01/L01002/|Kinetic theory for non-equilibrium stationary states in long-range interacting systems]]//, JOURNAL OF STATISTICAL MECHANICS-THEORY AND EXPERIMENT Article Number: L01002 DOI: 10.1088/1742-5468/2012/01/L01002, January 2012 * **Everaers, Ralf; Rosa, Angelo** //[[http://jcp.aip.org/resource/1/jcpsa6/v136/i1/p014902_s1|Multi-scale modeling of diffusion-controlled reactions in polymers: Renormalisation of reactivity parameters]]//, JOURNAL OF CHEMICAL PHYSICS Volume: 136 Issue: 1 Article Number: 014902 DOI: 10.1063/1.3673444, January 7, 2012 \\ * **Cesare Nardini, Shamik Gupta, Stefano Ruffo, Thierry Dauxois, Freddy Bouchet**, //[[http://arxiv.org/abs/1210.0492|Kinetic theory of nonequilibrium stochastic long-range systems: Phase transition and bistability]]//, J. Stat. Mech. Theory Exp. P12010 (2012) * **S. Gupta, A. Campa and S. Ruffo**, //[[http://pre.aps.org/abstract/PRE/v86/i6/e061130|Overdamped dynamics of long-range systems on a one-dimensional lattice: Dominance of the mean-field mode and phase transition]]//, Phys. Rev. E, 86, 061130 (2012). ==== 2011 ==== * **Anne Verjus et Denise Davidson**, //Le roman conjugal. Chroniques de la vie familiale à l'époque de la Révolution et de l'Empire//, Seyssel, Champ Vallon, 2011. * **Stéphanie Dord-Crouslé**, //Ce Louis-Philippe en littérature : Flaubert juge de Casimir Delavigne//. Sylvain Ledda et Florence Naugrette, //Casimir Delavigne en son temps// (Vie culturelle - Théâtre - Réception). Actes du colloque de Rouen, 24-25 octobre 2011, Eurédit, pp.327-339, 2012. * **Nadiga, Balasubramanya T.; Bouchet, Freddy**, //[[http://arxiv.org/abs/1210.1857|The equivalence of the Lagrangian-averaged Navier-Stokes-alpha model and the rational large eddy simulation model in two dimensions]]//, PHYSICS OF FLUIDS Volume: 23 Issue: 9 Article Number: 095105 DOI: 10.1063/1.3632084, September 2011 * **Venaille, Antoine; Bouchet, Freddy**, //[[http://link.springer.com/article/10.1007%2Fs10955-011-0168-0|Solvable Phase Diagrams and Ensemble Inequivalence for Two-Dimensional and Geophysical Turbulent Flows]]//, JOURNAL OF STATISTICAL PHYSICS Volume: 143 Issue: 2 Pages: 346-380 DOI: 10.1007/s10955-011-0168-0, April 2011 * **Venaille, Antoine; Bouchet, Freddy**, //[[http://iopscience.iop.org/1742-6596/318/7/072024/|Are oceanic rings and jets statistical equilibrium states ?]]//, Bajer, K; Kopec, J; Kursa, M; et al., 13th European Turbulence Conference (ETC) Location: Univ Warsaw, Warsaw, POLAND Date: September 12-15, 2011, 13TH EUROPEAN TURBULENCE CONFERENCE (ETC13): GEOPHYSICAL AND MAGNETOHYDRODYNAMIC TURBULENCE Book Series: Journal of Physics Conference Series Volume: 318 Article Number: 072024 DOI: 10.1088/1742-6596/318/7/072024 (2011) * **Meyer, Sam; Becker, Nils B.; Syed, Sajad Hussain; et al.**, //[[http://nar.oxfordjournals.org/content/39/21/9139|From crystal and NMR structures, footprints and cryo-electron-micrographs to large and soft structures: nanoscale modeling of the nucleosomal stem]]//, NUCLEIC ACIDS RESEARCH Volume: 39 Issue: 21 Pages: 9139-9154 DOI: 10.1093/nar/gkr573, November 2011 * **Jost, Daniel; Zubair, Asif; Everaers, Ralf**, //[[http://arxiv.org/abs/1103.3294v2|Bubble statistics and positioning in superhelically stressed DNA]]//, Physical Review E, Volume 84, Issue 3, Article Number 031912, DOI: 10.1103/PhysRevE.84.031912, Part 1, September 12 2011 * **Volk R.; Calzavarini E.; Lévêque E.; et al.**, //[[http://arxiv.org/abs/1001.4943|Dynamics of inertial particles in a turbulent von Karman flow]]//, JOURNAL OF FLUID MECHANICS Volume: 668 Pages: 223-235 DOI: 10.1017/S0022112010005690 (2011) * **Salort J; Roche PE; and E. Lévêque**, //[[http://iopscience.iop.org/0295-5075/94/2/24001/|Mesoscale equipartition of kinetic energy in quantum turbulence]]//, EPL Volume: 94 Issue: 2 Article Number: 24001 (2011) * **Vosskuhle, Michel; Pumir, Alain; Leveque, Emmanuel**, //[[http://iopscience.iop.org/1742-6596/318/5/052024/|Estimating the Collision Rate of Inertial Particles in a Turbulent Flow: Limitations of the "Ghost Collision" Approximation]]//, Conference: 13th European Turbulence Conference (ETC) Location: Univ Warsaw, Warsaw, Poland, September 12-15, 2011 - Journal of Physics Conference Series Volume: 318, Article Number: 052024, DOI: 10.1088/1742-6596/318/5/052024, 2011 ==== 2010 ==== * **Stéphanie Dord-Crouslé**, //De l'esclavage selon Flaubert//. Sarga Moussa, //Littérature et esclavage, XVIIIe-XIXe siècles//, Desjonquères, pp.371-382, 2010, L'esprit des lettres. * **Bouchet, Freddy; Gupta, Shamik; Mukamel, David**, //[[http://www.sciencedirect.com/science/article/pii/S0378437110001512|Thermodynamics and dynamics of systems with long-range interactions]]//, 12th International Summer School on Fundamental Problems in Statistical Physics Location: European Ctr Foresta, Leuven, BELGIUM, August 31-September 11, 2009 - PHYSICA A-STATISTICAL MECHANICS AND ITS APPLICATIONS Volume: 389 Issue: 20 Special Issue: SI Pages: 4389-4405 DOI: 10.1016/j.physa.2010.02.024, October 15, 2010 * **Bouchet, Freddy; Corvellec, Marianne**, //[[http://iopscience.iop.org/1742-5468/2010/08/P08021/|Invariant measures of the 2D Euler and Vlasov equations]]//, JOURNAL OF STATISTICAL MECHANICS-THEORY AND EXPERIMENT Article Number: P08021 DOI: 10.1088/1742-5468/2010/08/P08021, August 2010 * **Bouchet, Freddy; Morita, Hidetoshi**, //[[http://www.sciencedirect.com/science/article/pii/S0167278910000400|Large time behavior and asymptotic stability of the 2D Euler and linearized Euler equations]]//, PHYSICA D-NONLINEAR PHENOMENA Volume: 239 Issue: 12 Pages: 948-966 DOI: 10.1016/j.physd.2010.01.020, June 15, 2010 * **Olivetti, Alain; Barre, Julien; Marcos, Bruno; et al.**, //[[http://www.tandfonline.com/doi/full/10.1080/00411450.2011.567857|Breathing Dynamics for Systems of Interacting Particles in the Microcanonical and Canonical Descriptions, transport theory and Statistical Physics]]//, Volume: 39 Issue: 5-7 Special Issue: SI Pages: 524-551 DOI: 10.1080/00411450.2011.567857 (2010) * **A. Cahuzac, J. Boudet, P. Borgnat and E. Leveque** //[[http://pof.aip.org/resource/1/phfle6/v22/i12/p125104_s1|Smoothing algorithms for the mean-flow extraction in large-eddy simulation of complex turbulent flows]]//, Phys. Fluids 22, 125104, (2010) * **Ji-Xuan Hou, Carsten Svaneborg, Ralf Everaers, and Gary S. Grest**, //[[http://prl.aps.org/abstract/PRL/v105/i6/e068301|Stress Relaxation in Entangled Polymer Melts]]//, Phys. Rev. Lett. 105, 068301 (2010) * **Sajad Hussain Syed, Damien Goutte-Gattat, Nils Becker, Sam Meyer, Manu Shubhdarshan Shukla, Jeffrey J. Hayes, Ralf Everaers, Dimitar Angelov, Jan Bednar, Stefan Dimitrov**, //[[http://www.pnas.org/content/107/21/9620.abstract?sid=703d5b7e-aab0-4f79-a643-762ebbeb0e86|Single-base resolution mapping of H1–nucleosome interactions and 3D organization of the nucleosome]]//, Proceedings of the National Academy of Sciences, (2010) * **Rosa A, Becker NB, Everaers R**, //[[http://www.sciencedirect.com/science/article/pii/S0006349510002195|Looping Probabilities in Model Interphase Chromosomes]]//, BIOPHYSICAL JOURNAL, Volume: 98, Issue: 11, Pages: 2410-2419 (2010) * **N.B. Becker, A. Rosa and R. Everaers**, //[[http://epje.epj.org/index.php?option=com_article&access=standard&Itemid=129&url=/articles/epje/abs/2010/05/10189_2010_Article_9474/10189_2010_Article_9474.html|The radial distribution function of worm-like chains]]//, Eur. Phys. J. E Volume 32, Number 1, May 2010 * **Daniel Jost and Ralf Everaers**, //[[http://jcp.aip.org/resource/1/jcpsa6/v132/i9/p095101_s1|Prediction of RNA multiloop and pseudoknot conformations from a lattice-based, coarse-grain tertiary structure model]]//, J. Chem. Phys. 132, 095101 (2010) * **A. Naso and A. Prosperetti**, //[[http://iopscience.iop.org/1367-2630/12/3/033040|The interaction between a solid particle and a turbulent flow]]//, New J. Phys. 12, 033040 (2010) * **A. Naso, R. Monchaux, P.-H. Chavanis and B. Dubrulle**, //[[http://pre.aps.org/abstract/PRE/v81/i6/e066318|Statistical mechanics of Beltrami flows in axisymmetric geometry: Theory reexamined]]//, Phys. Rev. E 81, 066318 (2010) * **A. Naso, S. Thalabard, G. Collette, P.-H. Chavanis and B. Dubrulle**, //[[http://iopscience.iop.org/1742-5468/2010/06/P06019|Statistical mechanics of Beltrami flows in axisymmetric geometry: Equilibria and bifurcations]]//, J. Stat. Mech. P06019 (2010) ==== 2009 ==== * **Becker, Nils B.; Everaers, Ralf**, //[[http://jcp.aip.org/resource/1/jcpsa6/v130/i13/p135102_s1|DNA nanomechanics: How proteins deform the double helix]]//, JOURNAL OF CHEMICAL PHYSICS Volume: 130 Issue: 13 Article Number: 135102 DOI: 10.1063/1.3082157, April 7, 2009 * **Jost, Daniel; Everaers, Ralf**, //[[http://www.sciencedirect.com/science/article/pii/S0006349508000143|A Unified Poland-Scheraga Model of Oligo- and Polynucleotide DNA Melting: Salt Effects and Predictive Power]]//, BIOPHYSICAL JOURNAL Volume: 96 Issue: 3 Pages: 1056-1067 DOI: 10.1529/biophysj.108.134031, February 4, 2009 * **Jost, Daniel; Everaers, Ralf**, //[[http://iopscience.iop.org/0953-8984/21/3/034108/|Genome wide application of DNA melting analysis]]//, JOURNAL OF PHYSICS-CONDENSED MATTER Volume: 21 Issue: 3 Article Number: 034108 DOI: 10.1088/0953-8984/21/3/034108, January 21, 2009 * **N. B. Becker and R. Everaers** //[[http://www.sciencemag.org/content/325/5940/538.2.abstract|Comment on "Remeasuring the Double Helix"]]//, Science 325 (5940), 538-b, (2009) * **A. V. Klopper, Carsten Svaneborg and Ralf Everaers**, //[[http://epje.epj.org/index.php?option=com_article&access=standard&Itemid=129&url=/articles/epje/abs/2009/01/10189_2009_Article_9041/10189_2009_Article_9041.html|Microphase separation in cross-linked polymer blends. Efficient replica RPA post-processing of simulation data for homopolymer networks]]//, Eur. Phys. J. E 28, 89-96 (2009) * **Nils B. Becker and Ralf Everaers**, //[[http://jcp.aip.org/resource/1/jcpsa6/v130/i13/p135102_s1|DNA nanomechanics: How proteins deform the double helix]]//, J. Chem. Phys. 130, 135102 (2009) * **Roche PE, Barenghi CF, Leveque E**, //[[http://iopscience.iop.org/0295-5075/87/5/54006/|Quantum turbulence at finite temperature: The two-fluids cascade]]//, Source: EPL Volume: 87 Issue: 5 Article Number: 54006 (2009) * **Calzavarini E, Volk R, Bourgoin M, Leveque E, Pinton JF, Toschi F**, //[[http://hal.archives-ouvertes.fr/hal-00492251/|Acceleration statistics of finite-sized particles in turbulent flow: the role of Faxen forces]]//, JOURNAL OF FLUID MECHANICS, Volume: 630, Pages: 179-189, (2009) ==== 2008 ==== * **Rosa, Angelo; Everaers, Ralf**,[[http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.1000153|Structure and Dynamics of Interphase Chromosomes]], PLOS COMPUTATIONAL BIOLOGY Volume: 4 Issue: 8 Article Number: e1000153 DOI: 10.1371/journal.pcbi.1000153, August 22, 2008 * **Svaneborg, Carsten; Everaers, Ralf; Grest, Gary S.; et al.**, [[http://pubs.acs.org/doi/abs/10.1021/ma800018f|Connectivity and entanglement stress contributions in strained polymer networks]], MACROMOLECULES Volume: 41 Issue: 13 Pages: 4920-4928 DOI: 10.1021/ma800018f, July 8, 2008 * **Nariya Uchida, Gary S. Grest, and Ralf Everaers**, //[[http://jcp.aip.org/resource/1/jcpsa6/v128/i4/p044902_s1|Viscoelasticity and primitive path analysis of entangled polymer liquids: From F-actin to polyethylene]]//, J. Chem. Phys. 128, 044902 (2008) * **Pasichnyk, I.; Everaers, R.; Maggs, A. C.**, //[[http://pubs.acs.org/doi/abs/10.1021/jp077401m|Simulating Van der Waals interactions in water/hydrocarbon-based complex fluids]]//, JOURNAL OF PHYSICAL CHEMISTRY B Volume: 112 Issue: 6 Pages: 1761-1764 DOI: 10.1021/jp077401m, february 14, 2008 * **Uchidaa, Nariya; Grest, Gary S.; Everaers, Ralf**, //[[http://jcp.aip.org/resource/1/jcpsa6/v128/i4/p044902_s1|Viscoelasticity and primitive path analysis of entangled polymer liquids: From F-actin to polyethylene]]//, JOURNAL OF CHEMICAL PHYSICS Volume: 128 Issue: 4 Article Number: 044902 DOI: 10.1063/1.2825597, January 28, 2008